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  5. Gb_36640

Gb_36640


Description : component PYM of RNA quality control Exon Junction complex


Gene families : OG0006937 (Archaeplastida) Phylogenetic Tree(s): OG0006937_tree ,
OG_05_0006916 (LandPlants) Phylogenetic Tree(s): OG_05_0006916_tree ,
OG_06_0007531 (SeedPlants) Phylogenetic Tree(s): OG_06_0007531_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_36640
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AT1G11400 PYM partner of Y14-MAGO 0.03 Archaeplastida
Cre06.g279250 No alias RNA processing.RNA quality control Exon Junction complex... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0006751 glutathione catabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016842 amidine-lyase activity IEP Neighborhood
BP GO:0042219 cellular modified amino acid catabolic process IEP Neighborhood
BP GO:0043171 peptide catabolic process IEP Neighborhood
BP GO:0044273 sulfur compound catabolic process IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR015362 WIBG_mago-bd 64 90
No external refs found!