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  5. Gb_36851

Gb_36851


Description : Coatomer subunit gamma-2 OS=Oryza sativa subsp. japonica (sp|q6z382|copg2_orysj : 338.0)


Gene families : OG0003299 (Archaeplastida) Phylogenetic Tree(s): OG0003299_tree ,
OG_05_0028016 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0049578 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_36851
Cluster HCCA: Cluster_318

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00069290 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
AT4G34450 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.09 Archaeplastida
Cpa|evm.model.tig00020629.20 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 Archaeplastida
Cre06.g310750 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 Archaeplastida
GSVIVT01031955001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.07 Archaeplastida
LOC_Os03g12590.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.06 Archaeplastida
LOC_Os07g10150.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.07 Archaeplastida
Mp1g05250.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.05 Archaeplastida
Pp3c16_12310V3.1 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.04 Archaeplastida
Smo268757 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
Solyc01g109540.4.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.04 Archaeplastida
Zm00001e000949_P001 No alias subunit gamma of cargo adaptor F-subcomplex 0.09 Archaeplastida
Zm00001e011398_P002 No alias subunit gamma of cargo adaptor F-subcomplex 0.11 Archaeplastida
Zm00001e033065_P001 No alias subunit gamma of cargo adaptor F-subcomplex 0.1 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
CC GO:0017119 Golgi transport complex IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 77 265
No external refs found!