Description : Pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Arabidopsis thaliana (sp|q9fjw6|pp451_arath : 157.0)
Gene families : OG0003182 (Archaeplastida) Phylogenetic Tree(s): OG0003182_tree ,
OG_05_0003613 (LandPlants) Phylogenetic Tree(s): OG_05_0003613_tree ,
OG_06_0002765 (SeedPlants) Phylogenetic Tree(s): OG_06_0002765_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_37099 | |
Cluster | HCCA: Cluster_202 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00155p00027590 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g30610,... | 0.03 | Archaeplastida | |
Mp4g21410.1 | No alias | Pentatricopeptide repeat-containing protein At5g67570,... | 0.02 | Archaeplastida | |
Solyc02g069570.3.1 | No alias | Pentatricopeptide repeat-containing protein At1g30610,... | 0.02 | Archaeplastida | |
Solyc02g092320.2.1 | No alias | Pentatricopeptide repeat-containing protein At5g67570,... | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0003690 | double-stranded DNA binding | IEP | Neighborhood |
MF | GO:0004177 | aminopeptidase activity | IEP | Neighborhood |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
MF | GO:0008238 | exopeptidase activity | IEP | Neighborhood |
MF | GO:0008289 | lipid binding | IEP | Neighborhood |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 11 | 37 |
No external refs found! |