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  5. Gb_37111

Gb_37111


Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 224.0)


Gene families : OG0000390 (Archaeplastida) Phylogenetic Tree(s): OG0000390_tree ,
OG_05_0000129 (LandPlants) Phylogenetic Tree(s): OG_05_0000129_tree ,
OG_06_0000040 (SeedPlants) Phylogenetic Tree(s): OG_06_0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_37111
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Gb_02142 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 Archaeplastida
Gb_04117 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_04256 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_04911 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.11 Archaeplastida
Gb_04925 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_07934 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_08526 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.29 Archaeplastida
Gb_17559 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_18114 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.25 Archaeplastida
Gb_18456 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_19756 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.15 Archaeplastida
Gb_20537 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Gb_21087 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_23276 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 Archaeplastida
Gb_24315 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_31534 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 Archaeplastida
Gb_32952 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.2 Archaeplastida
Gb_34728 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_36049 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.17 Archaeplastida
Gb_36670 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.17 Archaeplastida
Gb_38275 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_39693 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.26 Archaeplastida
Gb_39735 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013103 RVT_2 181 307
No external refs found!