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  5. Gb_37393

Gb_37393


Description : transcription factor (zf-HD)


Gene families : OG0000209 (Archaeplastida) Phylogenetic Tree(s): OG0000209_tree ,
OG_05_0000122 (LandPlants) Phylogenetic Tree(s): OG_05_0000122_tree ,
OG_06_0000088 (SeedPlants) Phylogenetic Tree(s): OG_06_0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_37393
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00261450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AMTR_s00038p00027320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AMTR_s00119p00074870 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
GSVIVT01018947001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01023137001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
Gb_18045 No alias transcription factor (zf-HD) 0.05 Archaeplastida
LOC_Os02g47770.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os08g34010.1 No alias transcription factor (zf-HD) 0.05 Archaeplastida
LOC_Os08g37400.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
LOC_Os09g24820.1 No alias transcription factor (zf-HD) 0.05 Archaeplastida
MA_101972g0010 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Pp3c21_11010V3.1 No alias homeobox protein 22 0.02 Archaeplastida
Pp3c7_15000V3.1 No alias homeobox protein 33 0.04 Archaeplastida
Solyc01g102980.3.1 No alias transcription factor (zf-HD) 0.06 Archaeplastida
Solyc02g085160.1.1 No alias transcription factor (zf-HD) 0.05 Archaeplastida
Solyc04g014260.2.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Solyc04g080490.4.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 63 115
No external refs found!