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  5. Gb_37539

Gb_37539


Description : transcription factor (SBP)


Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0001192 (LandPlants) Phylogenetic Tree(s): OG_05_0001192_tree ,
OG_06_0004431 (SeedPlants) Phylogenetic Tree(s): OG_06_0004431_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_37539
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00198330 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AMTR_s00106p00144050 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.05 Archaeplastida
AT1G27370 SPL10 squamosa promoter binding protein-like 10 0.02 Archaeplastida
AT2G33810 SPL3 squamosa promoter binding protein-like 3 0.03 Archaeplastida
AT2G47070 SPL1 squamosa promoter binding protein-like 1 0.07 Archaeplastida
AT5G50570 SPL13, SPL13A Squamosa promoter-binding protein-like (SBP domain)... 0.03 Archaeplastida
AT5G50670 SPL13, SPL13B Squamosa promoter-binding protein-like (SBP domain)... 0.03 Archaeplastida
Cre10.g433350 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
GSVIVT01003836001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.04 Archaeplastida
GSVIVT01013452001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.05 Archaeplastida
GSVIVT01028208001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
LOC_Os02g04680.1 No alias transcription factor (SBP) 0.03 Archaeplastida
LOC_Os07g32170.1 No alias transcription factor (SBP) 0.02 Archaeplastida
LOC_Os08g40260.1 No alias transcription factor (SBP) 0.04 Archaeplastida
Mp1g10020.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Mp1g10030.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Mp1g13640.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Pp3c4_6000V3.1 No alias squamosa promoter binding protein-like 8 0.04 Archaeplastida
Solyc01g068100.4.1 No alias Squamosa promoter-binding-like protein 1 OS=Arabidopsis... 0.03 Archaeplastida
Solyc10g009080.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e009093_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e013198_P001 No alias transcription factor (SBP) 0.04 Archaeplastida
Zm00001e021425_P001 No alias transcription factor (SBP) 0.06 Archaeplastida
Zm00001e028442_P002 No alias transcription factor (SBP) 0.03 Archaeplastida
Zm00001e034628_P001 No alias transcription factor (SBP) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004333 SBP_dom 219 292
No external refs found!