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  5. Gb_37921

Gb_37921


Description : DExH-box ATP-dependent RNA helicase DExH11 OS=Arabidopsis thaliana (sp|f4jaa5|ski2_arath : 263.0)


Gene families : OG0000933 (Archaeplastida) Phylogenetic Tree(s): OG0000933_tree ,
OG_05_0006636 (LandPlants) Phylogenetic Tree(s): OG_05_0006636_tree ,
OG_06_0006570 (SeedPlants) Phylogenetic Tree(s): OG_06_0006570_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_37921

Target Alias Description ECC score Gene Family Method Actions
Mp1g05510.1 No alias RNA helicase component SKI2 of SUPERKILLER (SKI)... 0.02 Archaeplastida
Pp3c10_7310V3.1 No alias RNA helicase, ATP-dependent, SK12/DOB1 protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 29 172
No external refs found!