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Description : Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana (sp|q9scp4|pp279_arath : 401.0)
Gene families : OG0000306 (Archaeplastida) Phylogenetic Tree(s): OG0000306_tree ,
OG_05_0001965 (LandPlants) Phylogenetic Tree(s): OG_05_0001965_tree ,
OG_06_0051427 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_38049 | |
| Cluster | HCCA: Cluster_142 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G06430 | EMB2750 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Archaeplastida | |
| AT4G39620 | EMB2453, ATPPR5 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
| GSVIVT01023856001 | No alias | Protein THYLAKOID ASSEMBLY 8-like, chloroplastic... | 0.05 | Archaeplastida | |
| MA_12518g0010 | No alias | Pentatricopeptide repeat-containing protein PPR5... | 0.05 | Archaeplastida | |
| Mp1g15120.1 | No alias | Protein THYLAKOID ASSEMBLY 8-like, chloroplastic... | 0.02 | Archaeplastida | |
| Pp3c20_15110V3.1 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Archaeplastida | |
| Solyc03g120510.1.1 | No alias | Protein THYLAKOID ASSEMBLY 8, chloroplastic... | 0.04 | Archaeplastida | |
| Solyc12g098990.2.1 | No alias | Pentatricopeptide repeat-containing protein At3g06430,... | 0.03 | Archaeplastida | |
| Zm00001e023883_P001 | No alias | Pentatricopeptide repeat-containing protein PPR5,... | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003690 | double-stranded DNA binding | IEP | Neighborhood |
| MF | GO:0005509 | calcium ion binding | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0007346 | regulation of mitotic cell cycle | IEP | Neighborhood |
| CC | GO:0009521 | photosystem | IEP | Neighborhood |
| CC | GO:0009523 | photosystem II | IEP | Neighborhood |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0010564 | regulation of cell cycle process | IEP | Neighborhood |
| BP | GO:0015979 | photosynthesis | IEP | Neighborhood |
| MF | GO:0016874 | ligase activity | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0032465 | regulation of cytokinesis | IEP | Neighborhood |
| BP | GO:0032954 | regulation of cytokinetic process | IEP | Neighborhood |
| BP | GO:0032955 | regulation of division septum assembly | IEP | Neighborhood |
| BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Neighborhood |
| CC | GO:0044436 | thylakoid part | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051128 | regulation of cellular component organization | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0051301 | cell division | IEP | Neighborhood |
| BP | GO:0051302 | regulation of cell division | IEP | Neighborhood |
| BP | GO:0051726 | regulation of cell cycle | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| CC | GO:0098796 | membrane protein complex | IEP | Neighborhood |
| BP | GO:1901891 | regulation of cell septum assembly | IEP | Neighborhood |
| BP | GO:1902412 | regulation of mitotic cytokinesis | IEP | Neighborhood |
| CC | GO:1902494 | catalytic complex | IEP | Neighborhood |
| BP | GO:1903436 | regulation of mitotic cytokinetic process | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| CC | GO:1990204 | oxidoreductase complex | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| No external refs found! |