Gb_38109

Description : subfamily ABCG transporter

Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0000052 (SeedPlants) Phylogenetic Tree(s): OG_06_0000052_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_38109
Cluster	HCCA: Cluster_330

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00039p00225530	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
AMTR_s00056p00117010	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
AT1G15520	ABCG40, PDR12,...	pleiotropic drug resistance 12	0.03	Archaeplastida
AT2G29940	ATPDR3, PDR3	pleiotropic drug resistance 3	0.02	Archaeplastida
Cpa\|evm.model.tig00020892.22	No alias	ABC transporter G family member 51 OS=Oryza sativa...	0.02	Archaeplastida
GSVIVT01017201001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
LOC_Os01g08260.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
LOC_Os01g42370.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
LOC_Os01g42380.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
LOC_Os08g29570.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
MA_10427683g0010	No alias	subfamily ABCG transporter	0.02	Archaeplastida
MA_10429038g0010	No alias	subfamily ABCG transporter	0.03	Archaeplastida
MA_10429200g0010	No alias	ABC transporter G family member 34 OS=Arabidopsis...	0.02	Archaeplastida
MA_135152g0010	No alias	subfamily ABCG transporter	0.02	Archaeplastida
MA_17319g0020	No alias	subfamily ABCG transporter	0.03	Archaeplastida
MA_630122g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_84624g0010	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Mp2g21800.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Pp3c5_23360V3.1	No alias	pleiotropic drug resistance 7	0.02	Archaeplastida
Smo118688	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Solyc05g053610.2.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Solyc12g019620.2.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Solyc12g019640.2.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Zm00001e019932_P002	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e030669_P001	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e033689_P001	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e033690_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e035120_P001	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e039353_P001	No alias	subfamily ABCG transporter	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005543	phospholipid binding	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
MF	GO:0008289	lipid binding	IEP	Neighborhood
BP	GO:0016567	protein ubiquitination	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
BP	GO:0032446	protein modification by small protein conjugation	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	258	440
IPR013581	PDR_assoc	826	882
IPR029481	ABC_trans_N	171	232
IPR013525	ABC_2_trans	1285	1471
IPR013525	ABC_2_trans	596	818
IPR003439	ABC_transporter-like	987	1139

External Links

No external refs found!

Gb_38109

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation