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  5. Gb_38173

Gb_38173


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 193.0)


Gene families : OG0001636 (Archaeplastida) Phylogenetic Tree(s): OG0001636_tree ,
OG_05_0001022 (LandPlants) Phylogenetic Tree(s): OG_05_0001022_tree ,
OG_06_0000515 (SeedPlants) Phylogenetic Tree(s): OG_06_0000515_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_38173
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Gb_00584 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.22 Archaeplastida
Gb_01199 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida
Gb_01732 No alias no hits & (original description: none) 0.23 Archaeplastida
Gb_01798 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 Archaeplastida
Gb_02240 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.17 Archaeplastida
Gb_05178 No alias no hits & (original description: none) 0.25 Archaeplastida
Gb_06493 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.07 Archaeplastida
Gb_09166 No alias no hits & (original description: none) 0.19 Archaeplastida
Gb_09472 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.18 Archaeplastida
Gb_12432 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.2 Archaeplastida
Gb_15515 No alias no hits & (original description: none) 0.27 Archaeplastida
Gb_17944 No alias no hits & (original description: none) 0.17 Archaeplastida
Gb_18111 No alias no hits & (original description: none) 0.08 Archaeplastida
Gb_19243 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.11 Archaeplastida
Gb_19470 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.2 Archaeplastida
Gb_19496 No alias no hits & (original description: none) 0.17 Archaeplastida
Gb_19601 No alias no hits & (original description: none) 0.1 Archaeplastida
Gb_24913 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.2 Archaeplastida
Gb_26216 No alias no hits & (original description: none) 0.17 Archaeplastida
Gb_26792 No alias no hits & (original description: none) 0.17 Archaeplastida
Gb_27662 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.18 Archaeplastida
Gb_27706 No alias no hits & (original description: none) 0.12 Archaeplastida
Gb_28999 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.21 Archaeplastida
Gb_29655 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.17 Archaeplastida
Gb_31049 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.18 Archaeplastida
Gb_33290 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.14 Archaeplastida
Gb_33668 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.17 Archaeplastida
Gb_37743 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.18 Archaeplastida
Gb_39190 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.1 Archaeplastida
Gb_39862 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.11 Archaeplastida
Gb_40231 No alias no hits & (original description: none) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013103 RVT_2 749 952
No external refs found!