1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G03410

AT3G03410


Description : EF hand calcium-binding protein family


Gene families : OG0017615 (Archaeplastida) Phylogenetic Tree(s): OG0017615_tree ,
OG_05_0017383 (LandPlants) Phylogenetic Tree(s): OG_05_0017383_tree ,
OG_06_0016912 (SeedPlants) Phylogenetic Tree(s): OG_06_0016912_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G03410
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AT2G36180 No alias EF hand calcium-binding protein family 0.09 Archaeplastida
AT3G03400 No alias EF hand calcium-binding protein family 0.1 Archaeplastida
AT5G17470 No alias EF hand calcium-binding protein family 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit IEP Neighborhood
MF GO:0003883 CTP synthase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 39 60
IPR002048 EF_hand_dom 5 26
IPR002048 EF_hand_dom 66 127
No external refs found!