Gb_38349


Description : Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana (sp|q3edf8|ppr28_arath : 339.0)


Gene families : OG0030662 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0028503 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0026822 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_38349
Cluster HCCA: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
MA_20646g0010 No alias Pentatricopeptide repeat-containing protein At1g09900... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 555 586
IPR002885 Pentatricopeptide_repeat 659 691
IPR002885 Pentatricopeptide_repeat 161 212
IPR002885 Pentatricopeptide_repeat 246 275
IPR002885 Pentatricopeptide_repeat 215 238
IPR002885 Pentatricopeptide_repeat 277 326
IPR002885 Pentatricopeptide_repeat 347 396
IPR002885 Pentatricopeptide_repeat 487 536
IPR002885 Pentatricopeptide_repeat 699 743
IPR002885 Pentatricopeptide_repeat 593 642
IPR002885 Pentatricopeptide_repeat 417 466
No external refs found!