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  5. Gb_38659

Gb_38659


Description : PAP6/FLN1 cofactor of plastid-encoded RNA polymerase


Gene families : OG0000505 (Archaeplastida) Phylogenetic Tree(s): OG0000505_tree ,
OG_05_0006095 (LandPlants) Phylogenetic Tree(s): OG_05_0006095_tree ,
OG_06_0049972 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_38659
Cluster HCCA: Cluster_341

Target Alias Description ECC score Gene Family Method Actions
Gb_05959 No alias PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.03 Archaeplastida
LOC_Os01g63220.2 No alias PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.02 Archaeplastida
Zm00001e019266_P002 No alias PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR011611 PfkB_dom 316 487
No external refs found!