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  5. Gb_38906

Gb_38906


Description : transcription factor (OFP)


Gene families : OG0000130 (Archaeplastida) Phylogenetic Tree(s): OG0000130_tree ,
OG_05_0000050 (LandPlants) Phylogenetic Tree(s): OG_05_0000050_tree ,
OG_06_0000120 (SeedPlants) Phylogenetic Tree(s): OG_06_0000120_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_38906

Target Alias Description ECC score Gene Family Method Actions
AT1G06920 OFP4, ATOFP4 ovate family protein 4 0.03 Archaeplastida
GSVIVT01017984001 No alias RNA biosynthesis.transcriptional activation.OFP... 0.02 Archaeplastida
LOC_Os03g06350.1 No alias transcription factor (OFP) 0.01 Archaeplastida
LOC_Os05g36970.1 No alias transcription factor (OFP) 0.02 Archaeplastida
LOC_Os05g36990.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os07g48150.1 No alias transcription factor (OFP) 0.05 Archaeplastida
MA_10434319g0010 No alias transcription factor (OFP) 0.02 Archaeplastida
MA_2468787g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_8266620g0010 No alias transcription factor (OFP) 0.05 Archaeplastida
Smo417707 No alias RNA biosynthesis.transcriptional activation.OFP... 0.03 Archaeplastida
Solyc06g082460.1.1 No alias transcription factor (OFP) 0.01 Archaeplastida
Solyc11g006670.1.1 No alias transcription factor (OFP) 0.01 Archaeplastida
Zm00001e019825_P001 No alias transcription factor (OFP) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006458 Ovate_C 550 606
IPR025830 DNA_bnd_dom_ovate 1 38
No external refs found!