Gb_38929

Description : Serine/arginine-rich splicing factor SR45a OS=Arabidopsis thaliana (sp|q84th4|sr45a_arath : 154.0)

Gene families : OG0001100 (Archaeplastida) Phylogenetic Tree(s): OG0001100_tree ,
OG_05_0001443 (LandPlants) Phylogenetic Tree(s): OG_05_0001443_tree ,
OG_06_0001574 (SeedPlants) Phylogenetic Tree(s): OG_06_0001574_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_38929
Cluster	HCCA: Cluster_185

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01005197001	No alias	Serine/arginine-rich splicing factor SR45a...	0.03	Archaeplastida
Gb_20180	No alias	Serine/arginine-rich splicing factor SR45a...	0.05	Archaeplastida
Mp8g15180.1	No alias	Serine/arginine-rich splicing factor SR45a...	0.02	Archaeplastida
Pp3c1_27480V3.1	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Neighborhood
BP	GO:0009057	macromolecule catabolic process	IEP	Neighborhood
BP	GO:0016052	carbohydrate catabolic process	IEP	Neighborhood
MF	GO:0016160	amylase activity	IEP	Neighborhood
MF	GO:0016161	beta-amylase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	89	158

External Links

No external refs found!