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  5. Gb_38968

Gb_38968


Description : Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidopsis thaliana (sp|q9fld8|pp408_arath : 738.0)


Gene families : OG0008311 (Archaeplastida) Phylogenetic Tree(s): OG0008311_tree ,
OG_05_0007188 (LandPlants) Phylogenetic Tree(s): OG_05_0007188_tree ,
OG_06_0007441 (SeedPlants) Phylogenetic Tree(s): OG_06_0007441_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_38968
Cluster HCCA: Cluster_142


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
BP GO:0007346 regulation of mitotic cell cycle IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0010564 regulation of cell cycle process IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0032465 regulation of cytokinesis IEP Neighborhood
BP GO:0032954 regulation of cytokinetic process IEP Neighborhood
BP GO:0032955 regulation of division septum assembly IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
BP GO:0051302 regulation of cell division IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:1901891 regulation of cell septum assembly IEP Neighborhood
BP GO:1902412 regulation of mitotic cytokinesis IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
BP GO:1903436 regulation of mitotic cytokinetic process IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 597 615
IPR002885 Pentatricopeptide_repeat 351 379
IPR002885 Pentatricopeptide_repeat 733 758
IPR002885 Pentatricopeptide_repeat 624 672
IPR002885 Pentatricopeptide_repeat 448 481
IPR002885 Pentatricopeptide_repeat 382 427
IPR002885 Pentatricopeptide_repeat 277 321
IPR002885 Pentatricopeptide_repeat 488 532
No external refs found!