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  5. Gb_39002

Gb_39002


Description : transcriptional repressor (TPL). transcriptional co-repressor (TPL/TPR)


Gene families : OG0000601 (Archaeplastida) Phylogenetic Tree(s): OG0000601_tree ,
OG_05_0000851 (LandPlants) Phylogenetic Tree(s): OG_05_0000851_tree ,
OG_06_0000882 (SeedPlants) Phylogenetic Tree(s): OG_06_0000882_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39002
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00051p00079490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.01 Archaeplastida
AT2G25420 No alias transducin family protein / WD-40 repeat family protein 0.02 Archaeplastida
GSVIVT01031186001 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.02 Archaeplastida
Gb_32130 No alias transcriptional repressor (TPL). transcriptional... 0.02 Archaeplastida
Gb_37153 No alias transcriptional repressor (TPL). transcriptional... 0.01 Archaeplastida
MA_10434172g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10436445g0020 No alias transcriptional repressor (TPL). transcriptional... 0.04 Archaeplastida
MA_366520g0010 No alias Protein TPR2 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Solyc03g117360.4.1 No alias transcriptional repressor (TPL). transcriptional... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 899 932
IPR001680 WD40_repeat 450 484
No external refs found!