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  5. Gb_39094

Gb_39094


Description : Probable GTP-binding protein OBGM, mitochondrial OS=Oryza sativa subsp. japonica (sp|q2qz37|obgm_orysj : 455.0)


Gene families : OG0006343 (Archaeplastida) Phylogenetic Tree(s): OG0006343_tree ,
OG_05_0006492 (LandPlants) Phylogenetic Tree(s): OG_05_0006492_tree ,
OG_06_0006871 (SeedPlants) Phylogenetic Tree(s): OG_06_0006871_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39094
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00233420 evm_27.TU.AmTr_v1... Probable GTP-binding protein OBGM, mitochondrial... 0.03 Archaeplastida
LOC_Os11g47800.1 No alias Probable GTP-binding protein OBGM, mitochondrial... 0.03 Archaeplastida
MA_10437075g0040 No alias Probable GTP-binding protein OBGM, mitochondrial... 0.03 Archaeplastida
Smo412920 No alias Probable GTP-binding protein OBGM, mitochondrial... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Neighborhood
BP GO:0043545 molybdopterin cofactor metabolic process IEP Neighborhood
BP GO:0051189 prosthetic group metabolic process IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR006073 GTP_binding_domain 368 495
IPR006169 GTP1_OBG_dom 50 142
No external refs found!