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  5. Gb_39383

Gb_39383


Description : cytosolic chaperone (Hsp101)


Gene families : OG0000276 (Archaeplastida) Phylogenetic Tree(s): OG0000276_tree ,
OG_05_0004293 (LandPlants) Phylogenetic Tree(s): OG_05_0004293_tree ,
OG_06_0005428 (SeedPlants) Phylogenetic Tree(s): OG_06_0005428_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39383
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00086p00119290 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.06 Archaeplastida
AT1G74310 ATHSP101, HOT1, HSP101 heat shock protein 101 0.08 Archaeplastida
AT2G25140 CLPB4, CLPB-M, HSP98.7 casein lytic proteinase B4 0.07 Archaeplastida
AT5G15450 CLPB3, CLPB-P, APG6 casein lytic proteinase B3 0.03 Archaeplastida
Cre11.g467575 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
Cre11.g467644 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
GSVIVT01007880001 No alias External stimuli response.temperature.Hsp... 0.05 Archaeplastida
GSVIVT01011496001 No alias External stimuli response.temperature.Hsp... 0.04 Archaeplastida
GSVIVT01035900001 No alias External stimuli response.temperature.Hsp... 0.07 Archaeplastida
LOC_Os02g08490.1 No alias organellar chaperone (Clp-p|Clp-m) 0.07 Archaeplastida
LOC_Os03g31300.1 No alias organellar chaperone (Clp-p|Clp-m) 0.08 Archaeplastida
LOC_Os05g44340.1 No alias cytosolic chaperone (Hsp101) 0.08 Archaeplastida
MA_21130g0010 No alias Chaperone protein ClpB1 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Pp3c19_4790V3.1 No alias heat shock protein 101 0.06 Archaeplastida
Pp3c24_9060V3.1 No alias casein lytic proteinase B3 0.05 Archaeplastida
Smo170696 No alias External stimuli response.temperature.Hsp... 0.06 Archaeplastida
Smo174539 No alias External stimuli response.temperature.Hsp... 0.05 Archaeplastida
Smo411118 No alias External stimuli response.temperature.Hsp... 0.07 Archaeplastida
Solyc02g088610.4.1 No alias organellar chaperone (Clp-p|Clp-m) 0.03 Archaeplastida
Solyc03g115230.3.1 No alias cytosolic chaperone (Hsp101) 0.06 Archaeplastida
Solyc06g011380.2.1 No alias Chaperone protein ClpB4, mitochondrial OS=Arabidopsis... 0.03 Archaeplastida
Solyc06g011400.2.1 No alias Chaperone protein ClpB4, mitochondrial OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e002026_P002 No alias organellar chaperone (Clp-p|Clp-m) 0.05 Archaeplastida
Zm00001e032223_P001 No alias cytosolic chaperone (Hsp101) 0.07 Archaeplastida
Zm00001e038056_P001 No alias organellar chaperone (Clp-p|Clp-m) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004176 Clp_N 17 61
IPR004176 Clp_N 97 147
IPR003959 ATPase_AAA_core 205 340
IPR019489 Clp_ATPase_C 790 868
IPR003959 ATPase_AAA_core 620 784
No external refs found!