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  5. Gb_39472

Gb_39472


Description : chaperone (cpHsc70)


Gene families : OG0000690 (Archaeplastida) Phylogenetic Tree(s): OG0000690_tree ,
OG_05_0002019 (LandPlants) Phylogenetic Tree(s): OG_05_0002019_tree ,
OG_06_0003840 (SeedPlants) Phylogenetic Tree(s): OG_06_0003840_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39472
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00228720 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.02 Archaeplastida
AMTR_s00071p00117740 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.03 Archaeplastida
Cpa|evm.model.tig00001368.4 No alias External stimuli response.temperature.Hsp... 0.01 Archaeplastida
GSVIVT01008331001 No alias Stromal 70 kDa heat shock-related protein, chloroplastic... 0.06 Archaeplastida
MA_124140g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_630582g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c2_12240V3.1 No alias mitochondrial HSO70 2 0.02 Archaeplastida
Pp3c7_15180V3.1 No alias chloroplast heat shock protein 70-2 0.02 Archaeplastida
Smo267815 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
Solyc01g103450.3.1 No alias chaperone (cpHsc70) 0.03 Archaeplastida
Zm00001e017846_P002 No alias chaperone (cpHsc70) 0.06 Archaeplastida
Zm00001e039661_P002 No alias chaperone (cpHsc70) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006353 DNA-templated transcription, termination IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015995 chlorophyll biosynthetic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
MF GO:0035596 methylthiotransferase activity IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0050497 transferase activity, transferring alkylthio groups IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013126 Hsp_70_fam 78 672
No external refs found!