Gb_39497


Description : transcription factor (ERF)


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39497
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00264660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00010p00098700 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00010p00099690 evm_27.TU.AmTr_v1... Ethylene-responsive transcription factor ERF110... 0.03 Archaeplastida
AMTR_s00040p00195730 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00069p00140780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00069p00141520 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00099p00122430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00115p00032780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00150p00091360 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AT3G50260 DEAR1, CEJ1, ATERF#011 cooperatively regulated by ethylene and jasmonate 1 0.02 Archaeplastida
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.03 Archaeplastida
AT4G18450 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT4G25490 DREB1B, ATCBF1, CBF1 C-repeat/DRE binding factor 1 0.02 Archaeplastida
AT5G25810 tny Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
GSVIVT01010629001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013905001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013913001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013916001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013917001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013918001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013923001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013929001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01015037001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01020584001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01021098001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01022277001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01031747001 No alias Alpha-amylase type B isozyme OS=Hordeum vulgare 0.03 Archaeplastida
GSVIVT01035502001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01036388001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Gb_34846 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_36992 No alias transcription factor (DREB) 0.04 Archaeplastida
LOC_Os01g66270.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os02g45450.1 No alias Dehydration-responsive element-binding protein 1G... 0.04 Archaeplastida
LOC_Os04g48350.1 No alias Dehydration-responsive element-binding protein 1E... 0.03 Archaeplastida
LOC_Os07g42510.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os09g20350.1 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_100577g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_100724g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10082062g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_10370681g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_1037g0020 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_10436654g0010 No alias Ethylene-responsive transcription factor ERF018... 0.03 Archaeplastida
MA_116185g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_120531g0010 No alias transcription factor (ERF) 0.05 Archaeplastida
MA_12171g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_16778g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_184464g0010 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_19532g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_214063g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_288689g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_3405g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_467593g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_502153g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_5530g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_6305g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_6344433g0010 No alias No annotation 0.03 Archaeplastida
MA_69434g0020 No alias Ethylene-responsive transcription factor 1 OS=Solanum... 0.02 Archaeplastida
MA_7166g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_7168929g0010 No alias Ethylene-responsive transcription factor ERF016... 0.03 Archaeplastida
MA_81029g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_844983g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_914123g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_922309g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_9304g0020 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_959784g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_9785986g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
Mp1g20040.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Mp4g17430.1 No alias Ethylene-responsive transcription factor ERF112... 0.02 Archaeplastida
Mp7g17020.1 No alias Dehydration-responsive element-binding protein 2C... 0.02 Archaeplastida
Pp3c11_24520V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c16_13260V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c26_1890V3.1 No alias erf domain protein 9 0.03 Archaeplastida
Pp3c27_6030V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c4_2660V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c9_2020V3.1 No alias erf domain protein 9 0.02 Archaeplastida
Solyc02g077370.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc03g026270.3.1 No alias transcription factor (DREB). transcription factor (CBF/DREB1) 0.03 Archaeplastida
Solyc03g026280.3.1 No alias transcription factor (DREB). transcription factor (CBF/DREB1) 0.04 Archaeplastida
Solyc03g118190.4.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc03g124110.2.1 No alias transcription factor (DREB). transcription factor (CBF/DREB1) 0.03 Archaeplastida
Solyc06g035700.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc06g082590.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc07g053740.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc08g078170.1.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc08g078190.2.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc09g075420.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc09g089930.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc10g006130.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc10g009110.1.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc11g042560.1.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Solyc12g009240.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc12g042210.2.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e000400_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e000611_P001 No alias Ethylene-responsive transcription factor ERF073... 0.02 Archaeplastida
Zm00001e006982_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e007205_P001 No alias Dehydration-responsive element-binding protein 1E... 0.02 Archaeplastida
Zm00001e007350_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e009947_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e015430_P001 No alias Dehydration-responsive element-binding protein 1G... 0.02 Archaeplastida
Zm00001e016421_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e017516_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e019567_P001 No alias transcription factor (ERF) 0.05 Archaeplastida
Zm00001e021331_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e021579_P001 No alias Pathogenesis-related genes transcriptional activator... 0.04 Archaeplastida
Zm00001e023224_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e023804_P001 No alias Ethylene-responsive transcription factor ERF013... 0.02 Archaeplastida
Zm00001e023816_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023870_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e025840_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e026192_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e027351_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e028920_P001 No alias transcription factor (ERF) 0.06 Archaeplastida
Zm00001e031497_P001 No alias Ethylene-responsive transcription factor ABI4 OS=Oryza... 0.02 Archaeplastida
Zm00001e032033_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e033537_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e033790_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e033965_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e035837_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e038525_P001 No alias Ethylene-responsive transcription factor ERF013... 0.03 Archaeplastida
Zm00001e038819_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e040033_P001 No alias No annotation 0.05 Archaeplastida
Zm00001e041533_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e041620_P002 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e041781_P001 No alias transcription factor (DREB) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
BP GO:0006536 glutamate metabolic process IEP Neighborhood
BP GO:0006537 glutamate biosynthetic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
MF GO:0015930 glutamate synthase activity IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 20 69
No external refs found!