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  5. Gb_39504

Gb_39504


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 101.0)


Gene families : OG0001179 (Archaeplastida) Phylogenetic Tree(s): OG0001179_tree ,
OG_05_0000900 (LandPlants) Phylogenetic Tree(s): OG_05_0000900_tree ,
OG_06_0000586 (SeedPlants) Phylogenetic Tree(s): OG_06_0000586_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39504
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Gb_14962 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_33365 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida
Gb_36581 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 Archaeplastida
MA_165229g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_175829g0010 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
MA_35720g0010 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!