Gb_39592

Description : Serine/arginine-rich splicing factor SC35 OS=Arabidopsis thaliana (sp|q9fmg4|sc35_arath : 201.0)

Gene families : OG0001859 (Archaeplastida) Phylogenetic Tree(s): OG0001859_tree ,
OG_05_0001512 (LandPlants) Phylogenetic Tree(s): OG_05_0001512_tree ,
OG_06_0001418 (SeedPlants) Phylogenetic Tree(s): OG_06_0001418_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_39592
Cluster	HCCA: Cluster_248

Target	Alias	Description	ECC score	Gene Family Method	Actions
GSVIVT01009023001	No alias	Serine/arginine-rich splicing factor SC35 OS=Arabidopsis thaliana	0.07	Archaeplastida
Mp3g01600.1	No alias	Serine/arginine-rich splicing factor SC35 OS=Arabidopsis...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003735	structural constituent of ribosome	IEP	Neighborhood
MF	GO:0005198	structural molecule activity	IEP	Neighborhood
CC	GO:0005840	ribosome	IEP	Neighborhood
BP	GO:0006412	translation	IEP	Neighborhood
BP	GO:0006518	peptide metabolic process	IEP	Neighborhood
BP	GO:0043043	peptide biosynthetic process	IEP	Neighborhood
CC	GO:0043228	non-membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Neighborhood
BP	GO:0043603	cellular amide metabolic process	IEP	Neighborhood
BP	GO:0043604	amide biosynthetic process	IEP	Neighborhood
CC	GO:1990904	ribonucleoprotein complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	18	87

External Links

No external refs found!