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  5. Gb_39684

Gb_39684


Description : Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana (sp|p92523|m860_arath : 94.0)


Gene families : OG0000001 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000372 (LandPlants) Phylogenetic Tree(s): OG_05_0000372_tree ,
OG_06_0000167 (SeedPlants) Phylogenetic Tree(s): OG_06_0000167_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39684
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Gb_03956 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_03978 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_04560 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_05404 No alias no hits & (original description: none) 0.08 Archaeplastida
Gb_07009 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Gb_09554 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.15 Archaeplastida
Gb_09706 No alias no hits & (original description: none) 0.07 Archaeplastida
Gb_10577 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 Archaeplastida
Gb_13328 No alias no hits & (original description: none) 0.09 Archaeplastida
Gb_15436 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.1 Archaeplastida
Gb_16342 No alias Uncharacterized mitochondrial protein AtMg00860... 0.16 Archaeplastida
Gb_16793 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.07 Archaeplastida
Gb_17315 No alias Uncharacterized mitochondrial protein AtMg00860... 0.05 Archaeplastida
Gb_17670 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Gb_18223 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Gb_18576 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_18747 No alias Uncharacterized mitochondrial protein AtMg00860... 0.04 Archaeplastida
Gb_20325 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.15 Archaeplastida
Gb_21108 No alias Uncharacterized mitochondrial protein AtMg00860... 0.04 Archaeplastida
Gb_21346 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.11 Archaeplastida
Gb_21943 No alias Uncharacterized mitochondrial protein AtMg00860... 0.06 Archaeplastida
Gb_24142 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.07 Archaeplastida
Gb_25344 No alias Uncharacterized mitochondrial protein AtMg00860... 0.05 Archaeplastida
Gb_29150 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Gb_30072 No alias Uncharacterized mitochondrial protein AtMg00860... 0.09 Archaeplastida
Gb_30122 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Gb_30888 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Gb_32815 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_33106 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.14 Archaeplastida
Gb_33301 No alias Uncharacterized mitochondrial protein AtMg00860... 0.05 Archaeplastida
Gb_35925 No alias Uncharacterized mitochondrial protein AtMg00860... 0.06 Archaeplastida
Gb_36033 No alias no hits & (original description: none) 0.07 Archaeplastida
Gb_36965 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_38300 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_38708 No alias Uncharacterized mitochondrial protein AtMg00860... 0.12 Archaeplastida
Gb_40215 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.17 Archaeplastida
Pp3c3_35120V3.1 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 511 605
No external refs found!