Description : transcription factor (ARF)
Gene families : OG0000080 (Archaeplastida) Phylogenetic Tree(s): OG0000080_tree ,
OG_05_0009308 (LandPlants) Phylogenetic Tree(s): OG_05_0009308_tree ,
OG_06_0012392 (SeedPlants) Phylogenetic Tree(s): OG_06_0012392_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_39686 | |
Cluster | HCCA: Cluster_292 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00155p00082980 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.B3... | 0.02 | Archaeplastida | |
AT1G19220 | ARF19, IAA22, ARF11 | auxin response factor 19 | 0.02 | Archaeplastida | |
AT1G19850 | MP, IAA24, ARF5 | Transcriptional factor B3 family protein /... | 0.03 | Archaeplastida | |
AT1G59750 | ARF1 | auxin response factor 1 | 0.04 | Archaeplastida | |
AT2G33860 | ARF3, ETT | Transcriptional factor B3 family protein /... | 0.02 | Archaeplastida | |
AT5G37020 | ARF8, ATARF8 | auxin response factor 8 | 0.04 | Archaeplastida | |
AT5G62000 | HSS, ARF1-BP, ARF2, ORE14 | auxin response factor 2 | 0.02 | Archaeplastida | |
GSVIVT01004942001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
GSVIVT01020805001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.02 | Archaeplastida | |
GSVIVT01021128001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
GSVIVT01021552001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
GSVIVT01021553001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
GSVIVT01023149001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
GSVIVT01025159001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
GSVIVT01025198001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.01 | Archaeplastida | |
GSVIVT01025691001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
GSVIVT01035204001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.04 | Archaeplastida | |
GSVIVT01035205001 | No alias | Auxin response factor 12 OS=Oryza sativa subsp. japonica | 0.03 | Archaeplastida | |
Gb_23186 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
LOC_Os02g35140.1 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
LOC_Os04g36054.1 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
LOC_Os04g56850.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
LOC_Os04g57610.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
LOC_Os05g43920.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
LOC_Os06g46410.1 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
LOC_Os10g33940.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
LOC_Os11g32110.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
LOC_Os12g41950.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
MA_103763g0010 | No alias | Auxin response factor 6 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
MA_10432528g0010 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
MA_10432580g0010 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
MA_122218g0010 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
MA_137387g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
MA_40335g0010 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
Mp1g12750.1 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
Mp2g02890.1 | No alias | Auxin response factor 19 OS=Oryza sativa subsp. japonica... | 0.06 | Archaeplastida | |
Pp3c13_4720V3.1 | No alias | auxin response factor 6 | 0.03 | Archaeplastida | |
Pp3c26_11550V3.1 | No alias | auxin response factor 6 | 0.02 | Archaeplastida | |
Pp3c5_9420V3.1 | No alias | auxin response factor 2 | 0.02 | Archaeplastida | |
Solyc02g037530.3.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Solyc03g118290.3.1 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
Solyc05g047460.3.1 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
Solyc07g016180.3.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
Solyc08g008380.4.1 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
Solyc11g069190.2.1 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
Zm00001e003229_P002 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
Zm00001e004554_P002 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
Zm00001e006577_P003 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
Zm00001e012670_P001 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e018126_P002 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
Zm00001e020205_P004 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
Zm00001e030325_P003 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e032135_P002 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
Zm00001e032423_P002 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
Zm00001e041910_P003 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Neighborhood |
BP | GO:0000160 | phosphorelay signal transduction system | IEP | Neighborhood |
BP | GO:0000290 | deadenylation-dependent decapping of nuclear-transcribed mRNA | IEP | Neighborhood |
BP | GO:0000723 | telomere maintenance | IEP | Neighborhood |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Neighborhood |
BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
MF | GO:0003674 | molecular_function | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0003678 | DNA helicase activity | IEP | Neighborhood |
MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
MF | GO:0003968 | RNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
MF | GO:0004143 | diacylglycerol kinase activity | IEP | Neighborhood |
MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
MF | GO:0004673 | protein histidine kinase activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
CC | GO:0005634 | nucleus | IEP | Neighborhood |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0006401 | RNA catabolic process | IEP | Neighborhood |
BP | GO:0006402 | mRNA catabolic process | IEP | Neighborhood |
BP | GO:0007165 | signal transduction | IEP | Neighborhood |
BP | GO:0007186 | G-protein coupled receptor signaling pathway | IEP | Neighborhood |
BP | GO:0007205 | protein kinase C-activating G-protein coupled receptor signaling pathway | IEP | Neighborhood |
BP | GO:0007275 | multicellular organism development | IEP | Neighborhood |
MF | GO:0008047 | enzyme activator activity | IEP | Neighborhood |
BP | GO:0008150 | biological_process | IEP | Neighborhood |
BP | GO:0009057 | macromolecule catabolic process | IEP | Neighborhood |
BP | GO:0009719 | response to endogenous stimulus | IEP | Neighborhood |
BP | GO:0009725 | response to hormone | IEP | Neighborhood |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Neighborhood |
MF | GO:0009982 | pseudouridine synthase activity | IEP | Neighborhood |
BP | GO:0009987 | cellular process | IEP | Neighborhood |
BP | GO:0010033 | response to organic substance | IEP | Neighborhood |
BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
MF | GO:0016301 | kinase activity | IEP | Neighborhood |
MF | GO:0016740 | transferase activity | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Neighborhood |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
MF | GO:0016866 | intramolecular transferase activity | IEP | Neighborhood |
MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0032200 | telomere organization | IEP | Neighborhood |
BP | GO:0032501 | multicellular organismal process | IEP | Neighborhood |
BP | GO:0032502 | developmental process | IEP | Neighborhood |
MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
CC | GO:0033643 | host cell part | IEP | Neighborhood |
CC | GO:0033646 | host intracellular part | IEP | Neighborhood |
CC | GO:0033647 | host intracellular organelle | IEP | Neighborhood |
CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Neighborhood |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
BP | GO:0035556 | intracellular signal transduction | IEP | Neighborhood |
CC | GO:0042025 | host cell nucleus | IEP | Neighborhood |
BP | GO:0042221 | response to chemical | IEP | Neighborhood |
BP | GO:0042592 | homeostatic process | IEP | Neighborhood |
BP | GO:0043085 | positive regulation of catalytic activity | IEP | Neighborhood |
CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
BP | GO:0044093 | positive regulation of molecular function | IEP | Neighborhood |
CC | GO:0044217 | other organism part | IEP | Neighborhood |
BP | GO:0044248 | cellular catabolic process | IEP | Neighborhood |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Neighborhood |
BP | GO:0048856 | anatomical structure development | IEP | Neighborhood |
BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
BP | GO:0060249 | anatomical structure homeostasis | IEP | Neighborhood |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0065007 | biological regulation | IEP | Neighborhood |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR033389 | AUX/IAA_dom | 414 | 501 |
No external refs found! |