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  5. Gb_39699

Gb_39699


Description : Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana (sp|q9sn39|pp320_arath : 511.0)


Gene families : OG0009969 (Archaeplastida) Phylogenetic Tree(s): OG0009969_tree ,
OG_05_0057988 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0051030 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39699
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
MA_205762g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Smo109988 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.05 Archaeplastida
Smo441644 No alias No description available 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 277 302
IPR002885 Pentatricopeptide_repeat 47 73
IPR002885 Pentatricopeptide_repeat 218 244
IPR002885 Pentatricopeptide_repeat 583 607
IPR002885 Pentatricopeptide_repeat 246 275
IPR002885 Pentatricopeptide_repeat 305 352
IPR002885 Pentatricopeptide_repeat 508 556
IPR002885 Pentatricopeptide_repeat 407 454
IPR002885 Pentatricopeptide_repeat 143 191
No external refs found!