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  5. Gb_39828

Gb_39828


Description : no hits & (original description: none)


Gene families : OG0000015 (Archaeplastida) Phylogenetic Tree(s): OG0000015_tree ,
OG_05_0000013 (LandPlants) Phylogenetic Tree(s): OG_05_0000013_tree ,
OG_06_0000016 (SeedPlants) Phylogenetic Tree(s): OG_06_0000016_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39828

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00065780 evm_27.TU.AmTr_v1... Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana 0.01 Archaeplastida
AMTR_s00131p00053580 evm_27.TU.AmTr_v1... Auxin-induced protein 6B OS=Glycine max 0.01 Archaeplastida
GSVIVT01019105001 No alias Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01024123001 No alias Auxin-induced protein 15A OS=Glycine max 0.02 Archaeplastida
Gb_29890 No alias Auxin-induced protein 6B OS=Glycine max... 0.02 Archaeplastida
LOC_Os04g43740.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_124243g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_26797g0010 No alias no description available(sp|q9sl45|sau10_arath : 85.9) 0.04 Archaeplastida
MA_66619g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_9208g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g110580.2.1 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003676 SAUR_fam 43 121
No external refs found!