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  5. AT3G04780

AT3G04780


Description : Protein of unknown function (DUF1000)


Gene families : OG0006275 (Archaeplastida) Phylogenetic Tree(s): OG0006275_tree ,
OG_05_0007001 (LandPlants) Phylogenetic Tree(s): OG_05_0007001_tree ,
OG_06_0008750 (SeedPlants) Phylogenetic Tree(s): OG_06_0008750_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G04780
Cluster HCCA: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
Cre17.g730250 No alias PITH domain-containing protein At3g04780 OS=Arabidopsis thaliana 0.02 Archaeplastida
Mp6g04670.1 No alias PITH domain-containing protein At3g04780 OS=Arabidopsis... 0.03 Archaeplastida
Pp3c5_6010V3.1 No alias Protein of unknown function (DUF1000) 0.04 Archaeplastida
Zm00001e005977_P002 No alias PITH domain-containing protein At3g04780 OS=Arabidopsis... 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Neighborhood
MF GO:0000036 acyl carrier activity IEP Neighborhood
BP GO:0000280 nuclear division IEP Neighborhood
CC GO:0000322 storage vacuole IEP Neighborhood
CC GO:0000323 lytic vacuole IEP Neighborhood
CC GO:0000325 plant-type vacuole IEP Neighborhood
CC GO:0000326 protein storage vacuole IEP Neighborhood
CC GO:0000327 lytic vacuole within protein storage vacuole IEP Neighborhood
CC GO:0000428 DNA-directed RNA polymerase complex IEP Neighborhood
CC GO:0000502 proteasome complex IEP Neighborhood
MF GO:0003756 protein disulfide isomerase activity IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004582 dolichyl-phosphate beta-D-mannosyltransferase activity IEP Neighborhood
CC GO:0005665 RNA polymerase II, core complex IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
CC GO:0005798 Golgi-associated vesicle IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006366 transcription by RNA polymerase II IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006997 nucleus organization IEP Neighborhood
BP GO:0007000 nucleolus organization IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008320 protein transmembrane transporter activity IEP Neighborhood
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0009735 response to cytokinin IEP Neighborhood
BP GO:0009853 photorespiration IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010038 response to metal ion IEP Neighborhood
BP GO:0010043 response to zinc ion IEP Neighborhood
BP GO:0010498 proteasomal protein catabolic process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0022884 macromolecule transmembrane transporter activity IEP Neighborhood
CC GO:0030134 COPII-coated ER to Golgi transport vesicle IEP Neighborhood
CC GO:0030135 coated vesicle IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
CC GO:0030880 RNA polymerase complex IEP Neighborhood
CC GO:0031501 mannosyltransferase complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0033185 dolichol-phosphate-mannose synthase complex IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034976 response to endoplasmic reticulum stress IEP Neighborhood
BP GO:0035966 response to topologically incorrect protein IEP Neighborhood
MF GO:0042887 amide transmembrane transporter activity IEP Neighborhood
BP GO:0043090 amino acid import IEP Neighborhood
BP GO:0043094 cellular metabolic compound salvage IEP Neighborhood
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
MF GO:0044620 ACP phosphopantetheine attachment site binding IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048316 seed development IEP Neighborhood
MF GO:0051192 prosthetic group binding IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051302 regulation of cell division IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0051788 response to misfolded protein IEP Neighborhood
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0080129 proteasome core complex assembly IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
MF GO:1904680 peptide transmembrane transporter activity IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
CC GO:1905369 endopeptidase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR010400 PITH_dom 16 159
No external refs found!