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  5. Gb_39931

Gb_39931


Description : transcription factor (AP2)


Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree ,
OG_05_0000090 (LandPlants) Phylogenetic Tree(s): OG_05_0000090_tree ,
OG_06_0000054 (SeedPlants) Phylogenetic Tree(s): OG_06_0000054_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39931
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00225230 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00058p00216470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00065p00077750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AT1G16060 ADAP ARIA-interacting double AP2 domain protein 0.02 Archaeplastida
AT3G20840 PLT1 Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT3G54320 WRI1, ATWRI1, ASML1, WRI Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT5G57390 AIL5, EMK, CHO1 AINTEGUMENTA-like 5 0.02 Archaeplastida
Cre13.g602750 No alias No description available 0.01 Archaeplastida
GSVIVT01002536001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01016097001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01016764001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01023697001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
Gb_18139 No alias transcription factor (AP2) 0.03 Archaeplastida
LOC_Os03g12950.1 No alias no description available(sp|q84z02|crl5_orysj : 102.0) 0.02 Archaeplastida
LOC_Os03g56050.1 No alias transcription factor (AP2) 0.02 Archaeplastida
LOC_Os05g03040.1 No alias transcription factor (AP2) 0.02 Archaeplastida
LOC_Os07g03250.1 No alias transcription factor (AP2) 0.03 Archaeplastida
LOC_Os07g39110.2 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10005612g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_113625g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_30905g0010 No alias transcription factor (AP2) 0.02 Archaeplastida
MA_8090186g0010 No alias transcription factor (AP2) 0.02 Archaeplastida
MA_86195g0010 No alias transcription factor (AP2) 0.04 Archaeplastida
MA_95471g0010 No alias transcription factor (AP2) 0.03 Archaeplastida
Pp3c10_24550V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c15_24980V3.1 No alias AINTEGUMENTA-like 5 0.02 Archaeplastida
Pp3c23_13360V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Smo48904 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
Solyc01g096860.3.1 No alias transcription factor (AP2) 0.02 Archaeplastida
Solyc02g092050.3.1 No alias transcription factor (AP2) 0.04 Archaeplastida
Solyc03g117720.3.1 No alias transcription factor (AP2) 0.03 Archaeplastida
Solyc03g123430.4.1 No alias transcription factor (AP2) 0.02 Archaeplastida
Solyc04g077490.3.1 No alias transcription factor (AP2) 0.03 Archaeplastida
Solyc11g061750.2.1 No alias transcription factor (AP2) 0.03 Archaeplastida
Solyc11g072600.3.1 No alias transcription factor (AP2) 0.03 Archaeplastida
Zm00001e004083_P002 No alias transcription factor (AP2) 0.02 Archaeplastida
Zm00001e009225_P003 No alias transcription factor (AP2) 0.02 Archaeplastida
Zm00001e024044_P002 No alias transcription factor (AP2) 0.02 Archaeplastida
Zm00001e027593_P003 No alias transcription factor (AP2) 0.03 Archaeplastida
Zm00001e029525_P003 No alias transcription factor (AP2) 0.02 Archaeplastida
Zm00001e034197_P002 No alias transcription factor (AP2) 0.04 Archaeplastida
Zm00001e037501_P005 No alias transcription factor (AP2) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
BP GO:0006177 GMP biosynthetic process IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0009163 nucleoside biosynthetic process IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0042278 purine nucleoside metabolic process IEP Neighborhood
BP GO:0042451 purine nucleoside biosynthetic process IEP Neighborhood
BP GO:0042455 ribonucleoside biosynthetic process IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
BP GO:0046037 GMP metabolic process IEP Neighborhood
BP GO:0046128 purine ribonucleoside metabolic process IEP Neighborhood
BP GO:0046129 purine ribonucleoside biosynthetic process IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
BP GO:1901068 guanosine-containing compound metabolic process IEP Neighborhood
BP GO:1901070 guanosine-containing compound biosynthetic process IEP Neighborhood
BP GO:1901659 glycosyl compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 178 229
No external refs found!