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  5. Gb_39955

Gb_39955


Description : Matrixin-type metalloprotease


Gene families : OG0001252 (Archaeplastida) Phylogenetic Tree(s): OG0001252_tree ,
OG_05_0000861 (LandPlants) Phylogenetic Tree(s): OG_05_0000861_tree ,
OG_06_0001192 (SeedPlants) Phylogenetic Tree(s): OG_06_0001192_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39955
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00201730 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.metallopeptidase... 0.04 Archaeplastida
AT1G24140 No alias Matrixin family protein 0.03 Archaeplastida
AT1G59970 No alias Matrixin family protein 0.03 Archaeplastida
LOC_Os02g50730.1 No alias Matrixin-type metalloprotease 0.05 Archaeplastida
LOC_Os06g13180.1 No alias Matrixin-type metalloprotease 0.03 Archaeplastida
LOC_Os10g40830.1 No alias Matrixin-type metalloprotease 0.04 Archaeplastida
MA_10426152g0010 No alias Matrixin-type metalloprotease 0.03 Archaeplastida
Pp3c6_6760V3.1 No alias Matrixin family protein 0.02 Archaeplastida
Solyc04g005050.1.1 No alias Matrixin-type metalloprotease 0.04 Archaeplastida
Zm00001e002324_P001 No alias Matrixin-type metalloprotease 0.02 Archaeplastida
Zm00001e015780_P001 No alias Matrixin-type metalloprotease 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0031012 extracellular matrix IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Neighborhood
CC GO:0005779 integral component of peroxisomal membrane IEP Neighborhood
BP GO:0006570 tyrosine metabolic process IEP Neighborhood
BP GO:0006571 tyrosine biosynthetic process IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
BP GO:0016559 peroxisome fission IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
CC GO:0044438 microbody part IEP Neighborhood
CC GO:0044439 peroxisomal part IEP Neighborhood
BP GO:0048285 organelle fission IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
InterPro domains Description Start Stop
IPR002477 Peptidoglycan-bd-like 74 130
IPR001818 Pept_M10_metallopeptidase 180 337
No external refs found!