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  5. Gb_40065

Gb_40065


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000006 (SeedPlants) Phylogenetic Tree(s): OG_06_0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40065
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00030p00146410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00032p00057800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00079p00140660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00133p00071910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G09540 ATMYB61, MYB61 myb domain protein 61 0.02 Archaeplastida
AT1G17950 BW52, ATMYB52, MYB52 myb domain protein 52 0.05 Archaeplastida
AT1G22640 MYB3, ATMYB3 myb domain protein 3 0.03 Archaeplastida
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.04 Archaeplastida
AT1G69560 LOF2, MYB105, ATMYB105 myb domain protein 105 0.05 Archaeplastida
AT1G79180 ATMYB63, MYB63 myb domain protein 63 0.04 Archaeplastida
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.02 Archaeplastida
AT3G06490 BOS1, AtMYB108, MYB108 myb domain protein 108 0.03 Archaeplastida
AT4G12350 AtMYB42, MYB42 myb domain protein 42 0.03 Archaeplastida
AT4G22680 AtMYB85, MYB85 myb domain protein 85 0.06 Archaeplastida
AT4G33450 ATMYB69, MYB69 myb domain protein 69 0.06 Archaeplastida
AT5G49330 PFG3, ATMYB111, MYB111 myb domain protein 111 0.04 Archaeplastida
AT5G56110 MYB103,... myb domain protein 103 0.05 Archaeplastida
AT5G62320 ATMYB99, ATMYBCU15, MYB99 myb domain protein 99 0.05 Archaeplastida
Cpa|evm.model.tig00000663.2 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Cre12.g522400 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01004464001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01008090001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01009032001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01009280001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01013126001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01014770001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01015102001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01016800001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01018577001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01024353001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01028235001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01031341001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01033418001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035177001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_02020 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_09907 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g07450.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g18240.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g36460.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g45090.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g50110.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g50720.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g51260.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g59660.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g02370.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g41510.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g42870.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g54520.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os03g18480.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os03g19120.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g25550.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os04g08590.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g38740.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os04g39470.1 No alias transcription factor (MYB). transcriptional key... 0.03 Archaeplastida
LOC_Os04g43680.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g04210.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os05g04820.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os05g48010.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os06g10350.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os08g15020.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os08g33940.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os09g36730.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os10g33810.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os11g03440.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os11g10130.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os12g03150.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os12g07640.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os12g37690.1 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10225049g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10433651g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_17672g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_21440g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_355131g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_37256g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_446064g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_52293g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_79447g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_81763g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_83918g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_93127g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_95012g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_95747g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
Mp4g04750.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp4g04760.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c15_19246V3.1 No alias myb domain protein 3r-4 0.02 Archaeplastida
Pp3c16_9970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c18_340V3.1 No alias myb domain protein 105 0.02 Archaeplastida
Pp3c1_1650V3.1 No alias myb domain protein 105 0.03 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.02 Archaeplastida
Pp3c9_10290V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Smo84369 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Smo84608 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc01g087130.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc01g094360.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc01g111500.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g067340.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g067760.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g086690.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g088190.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g091980.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g059200.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g113530.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc10g005760.3.1 No alias transcription factor (MYB). transcriptional key... 0.03 Archaeplastida
Solyc10g055410.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e001341_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e004164_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e007904_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e009453_P002 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e013910_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e016583_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e017428_P003 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e017496_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020004_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e024037_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e026426_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e026464_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e030961_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e032347_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e036684_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e038287_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e038356_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e039235_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e039756_P002 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e041055_P001 No alias transcription factor (MYB). transcriptional key... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 78 121
IPR001005 SANT/Myb 25 72
No external refs found!