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  5. Gb_40121

Gb_40121


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 619.0)


Gene families : OG0012771 (Archaeplastida) Phylogenetic Tree(s): OG0012771_tree ,
OG_05_0000472 (LandPlants) Phylogenetic Tree(s): OG_05_0000472_tree ,
OG_06_0000277 (SeedPlants) Phylogenetic Tree(s): OG_06_0000277_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40121
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
MA_178429g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
MA_44339g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.07 Archaeplastida
MA_90791g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 391 439
IPR002885 Pentatricopeptide_repeat 289 337
IPR002885 Pentatricopeptide_repeat 99 146
IPR032867 DYW_dom 565 688
IPR002885 Pentatricopeptide_repeat 171 197
IPR002885 Pentatricopeptide_repeat 230 260
IPR002885 Pentatricopeptide_repeat 465 490
IPR002885 Pentatricopeptide_repeat 199 228
No external refs found!