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  5. Gb_40149

Gb_40149


Description : VPS46/CHMP1 associated protein of ESCRT-III complex


Gene families : OG0002047 (Archaeplastida) Phylogenetic Tree(s): OG0002047_tree ,
OG_05_0002010 (LandPlants) Phylogenetic Tree(s): OG_05_0002010_tree ,
OG_06_0002531 (SeedPlants) Phylogenetic Tree(s): OG_06_0002531_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40149
Cluster HCCA: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
AT1G73030 CHMP1A, VPS46.2 SNF7 family protein 0.03 Archaeplastida
Cpa|evm.model.tig00020554.72 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.01 Archaeplastida
Cre03.g188500 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 Archaeplastida
MA_6597368g0010 No alias VPS46/CHMP1 associated protein of ESCRT-III complex 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR005024 Snf7_fam 11 173
No external refs found!