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  5. Gb_40354

Gb_40354


Description : Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Arabidopsis thaliana (sp|q8vy00|esp3_arath : 594.0)


Gene families : OG0000159 (Archaeplastida) Phylogenetic Tree(s): OG0000159_tree ,
OG_05_0006093 (LandPlants) Phylogenetic Tree(s): OG_05_0006093_tree ,
OG_06_0005453 (SeedPlants) Phylogenetic Tree(s): OG_06_0005453_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40354
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
Cre07.g329150 No alias Pre-mRNA-splicing factor ATP-dependent RNA helicase... 0.02 Archaeplastida
Cre11.g467654 No alias Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.01 Archaeplastida
Pp3c1_18490V3.1 No alias RNA helicase family protein 0.01 Archaeplastida
Pp3c23_5290V3.1 No alias RNA helicase family protein 0.01 Archaeplastida
Pp3c24_70V3.1 No alias RNA helicase family protein 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 267 355
IPR001650 Helicase_C 76 205
No external refs found!