1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_40389

Gb_40389


Description : Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana (sp|q9c7a2|itn1_arath : 138.0)


Gene families : OG0000783 (Archaeplastida) Phylogenetic Tree(s): OG0000783_tree ,
OG_05_0011054 (LandPlants) Phylogenetic Tree(s): OG_05_0011054_tree ,
OG_06_0011039 (SeedPlants) Phylogenetic Tree(s): OG_06_0011039_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40389
Cluster HCCA: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01001633001 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01001639001 No alias No description available 0.03 Archaeplastida
GSVIVT01013569001 No alias No description available 0.03 Archaeplastida
GSVIVT01013591001 No alias Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01018107001 No alias Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_26484 No alias Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.04 Archaeplastida
LOC_Os11g14570.1 No alias Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 390 417
IPR002110 Ankyrin_rpt 137 167
IPR020683 Ankyrin_rpt-contain_dom 17 113
IPR020683 Ankyrin_rpt-contain_dom 230 314
IPR026961 PGG_dom 479 583
No external refs found!