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Gb_40571


Description : p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL)


Gene families : OG0000179 (Archaeplastida) Phylogenetic Tree(s): OG0000179_tree ,
OG_05_0001067 (LandPlants) Phylogenetic Tree(s): OG_05_0001067_tree ,
OG_06_0001032 (SeedPlants) Phylogenetic Tree(s): OG_06_0001032_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40571
Cluster HCCA: Cluster_278

Target Alias Description ECC score Gene Family Method Actions
AT1G20510 OPCL1 OPC-8:0 CoA ligase1 0.05 Archaeplastida
GSVIVT01008694001 No alias 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_40573 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 Archaeplastida
LOC_Os01g67530.1 No alias 4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp.... 0.04 Archaeplastida
LOC_Os02g08100.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 Archaeplastida
LOC_Os08g34790.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 Archaeplastida
MA_14460g0010 No alias OPC-8:CoA synthetase 0.03 Archaeplastida
MA_20580g0050 No alias OPC-8:CoA synthetase 0.05 Archaeplastida
Mp1g05060.1 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Pp3c8_730V3.1 No alias acyl-CoA synthetase 5 0.03 Archaeplastida
Smo177393 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.05 Archaeplastida
Smo181279 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.07 Archaeplastida
Solyc02g088710.3.1 No alias acyl-CoA synthetase (ACS5) 0.02 Archaeplastida
Solyc03g111170.3.1 No alias 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e000264_P001 No alias OPC-8:CoA synthetase 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 467 542
IPR000873 AMP-dep_Synth/Lig 51 458
No external refs found!