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Gb_40721


Description : DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa subsp. japonica (sp|q0db53|rh52a_orysj : 318.0)


Gene families : OG0007416 (Archaeplastida) Phylogenetic Tree(s): OG0007416_tree ,
OG_05_0008404 (LandPlants) Phylogenetic Tree(s): OG_05_0008404_tree ,
OG_06_0012656 (SeedPlants) Phylogenetic Tree(s): OG_06_0012656_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40721
Cluster HCCA: Cluster_324

Target Alias Description ECC score Gene Family Method Actions
Pp3c1_12370V3.1 No alias DEA(D/H)-box RNA helicase family protein 0.02 Archaeplastida
Pp3c2_25130V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
Smo75384 No alias DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 167 337
IPR001650 Helicase_C 374 491
No external refs found!