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  5. Gb_40746

Gb_40746


Description : Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus (sp|c6l7u1|lin1_lotja : 409.0)


Gene families : OG0001418 (Archaeplastida) Phylogenetic Tree(s): OG0001418_tree ,
OG_05_0010935 (LandPlants) Phylogenetic Tree(s): OG_05_0010935_tree ,
OG_06_0010888 (SeedPlants) Phylogenetic Tree(s): OG_06_0010888_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40746
Cluster HCCA: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
AT3G06880 No alias Transducin/WD40 repeat-like superfamily protein 0.07 Archaeplastida
Mp3g09570.1 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.02 Archaeplastida
Zm00001e031427_P002 No alias Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!