Gb_40747


Description : microtubule - plasma membrane linkage regulator (IQD13)


Gene families : OG0000181 (Archaeplastida) Phylogenetic Tree(s): OG0000181_tree ,
OG_05_0000202 (LandPlants) Phylogenetic Tree(s): OG_05_0000202_tree ,
OG_06_0012882 (SeedPlants) Phylogenetic Tree(s): OG_06_0012882_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40747
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00247260 evm_27.TU.AmTr_v1... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00021p00158910 evm_27.TU.AmTr_v1... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00066p00152910 evm_27.TU.AmTr_v1... Cytoskeleton.cytoskeleton-plasma membrane-cell wall... 0.03 Archaeplastida
AT1G01110 IQD18 IQ-domain 18 0.03 Archaeplastida
AT2G26410 Iqd4 IQ-domain 4 0.03 Archaeplastida
AT2G33990 iqd9 IQ-domain 9 0.03 Archaeplastida
AT3G15050 IQD10 IQ-domain 10 0.05 Archaeplastida
AT5G35670 iqd33 IQ-domain 33 0.03 Archaeplastida
GSVIVT01014238001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01027429001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os01g09790.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g04210.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g57330.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g03190.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os06g40850.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os08g02250.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10430537g0020 No alias Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_6756408g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_8080485g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_91691g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp3g23600.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp7g08970.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c1_38330V3.1 No alias IQ-domain 6 0.02 Archaeplastida
Pp3c21_11850V3.1 No alias IQ-domain 3 0.04 Archaeplastida
Pp3c22_12150V3.1 No alias IQ-domain 6 0.02 Archaeplastida
Pp3c4_23600V3.1 No alias IQ-domain 2 0.03 Archaeplastida
Pp3c4_3290V3.1 No alias IQ-domain 2 0.03 Archaeplastida
Smo438938 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
Smo441008 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo67789 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc02g077260.3.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc03g083100.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc09g007410.3.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc10g084280.2.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc12g014130.2.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e005923_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e020006_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e027583_P001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e029506_P001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e036466_P001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e037612_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006555 methionine metabolic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008172 S-methyltransferase activity IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009086 methionine biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR025064 DUF4005 784 849
IPR000048 IQ_motif_EF-hand-BS 519 537
No external refs found!