Gb_40888

Description : Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana (sp|q9shz8|pp168_arath : 613.0)

Gene families : OG0014370 (Archaeplastida) Phylogenetic Tree(s): OG0014370_tree ,
OG_05_0015832 (LandPlants) Phylogenetic Tree(s): OG_05_0015832_tree ,
OG_06_0014184 (SeedPlants) Phylogenetic Tree(s): OG_06_0014184_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_40888
Cluster	HCCA: Cluster_125

Target	Alias	Description	ECC score	Gene Family Method	Actions
GSVIVT01022202001	No alias	Pentatricopeptide repeat-containing protein At2g22070...	0.05	Archaeplastida
MA_163282g0010	No alias	Pentatricopeptide repeat-containing protein At2g22070...	0.1	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	200	247
IPR002885	Pentatricopeptide_repeat	433	480
IPR002885	Pentatricopeptide_repeat	332	376
IPR032867	DYW_dom	606	730
IPR002885	Pentatricopeptide_repeat	143	170
IPR002885	Pentatricopeptide_repeat	276	300
IPR002885	Pentatricopeptide_repeat	508	531
IPR002885	Pentatricopeptide_repeat	573	602

External Links

No external refs found!