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  5. Gb_40986

Gb_40986


Description : Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana (sp|q9suh6|pp341_arath : 199.0)


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0028333 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0026631 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40986
Cluster HCCA: Cluster_596

Target Alias Description ECC score Gene Family Method Actions
AT1G22830 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Archaeplastida
AT3G46790 CRR2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
GSVIVT01027001001 No alias Protein modification.phosphorylation.TKL kinase... 0.01 Archaeplastida
LOC_Os10g39460.2 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
Smo96927 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.01 Archaeplastida
Solyc12g096680.1.1 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 165 189
IPR002885 Pentatricopeptide_repeat 137 164
IPR032867 DYW_dom 349 424
No external refs found!