Gb_41078

Description : RING-v-class E3 ligase

Gene families : OG0001724 (Archaeplastida) Phylogenetic Tree(s): OG0001724_tree ,
OG_05_0001369 (LandPlants) Phylogenetic Tree(s): OG_05_0001369_tree ,
OG_06_0027061 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_41078
Cluster	HCCA: Cluster_319

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT5G60580	No alias	RING/U-box superfamily protein	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004177	aminopeptidase activity	IEP	Neighborhood
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
MF	GO:0008238	exopeptidase activity	IEP	Neighborhood
MF	GO:0008289	lipid binding	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0030145	manganese ion binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR011016	Znf_RING-CH	43	90

External Links

No external refs found!