Gb_41122

Description : Probable aquaporin PIP1-4 OS=Arabidopsis thaliana (sp|q39196|pip14_arath : 122.0)

Gene families : OG0000026 (Archaeplastida) Phylogenetic Tree(s): OG0000026_tree ,
OG_05_0062732 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0056143 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_41122
Cluster	HCCA: Cluster_86

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01018189001	No alias	Solute transport.channels.MIP family.tonoplast intrinsic...	0.03	Archaeplastida
GSVIVT01018678001	No alias	Solute transport.channels.MIP family.tonoplast intrinsic...	0.03	Archaeplastida
MA_46360g0010	No alias	tonoplast intrinsic protein (TIP)	0.02	Archaeplastida
MA_7746656g0020	No alias	Aquaporin TIP1-3 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Mp5g09360.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Mp6g11780.1	No alias	tonoplast intrinsic protein (TIP)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015267	channel activity	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan

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Type	GO Term	Name	Evidence	Source
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Neighborhood
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Neighborhood
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Neighborhood
BP	GO:0043038	amino acid activation	IEP	Neighborhood
BP	GO:0043039	tRNA aminoacylation	IEP	Neighborhood
MF	GO:0043531	ADP binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000425	MIP	91	130
IPR019446	DUF2431	2	60
IPR001611	Leu-rich_rpt	302	361

External Links

No external refs found!

Gb_41122

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation