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  5. Gb_41260

Gb_41260


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 226.0)


Gene families : OG0000390 (Archaeplastida) Phylogenetic Tree(s): OG0000390_tree ,
OG_05_0000129 (LandPlants) Phylogenetic Tree(s): OG_05_0000129_tree ,
OG_06_0000040 (SeedPlants) Phylogenetic Tree(s): OG_06_0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_41260
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Gb_00583 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.15 Archaeplastida
Gb_01443 No alias no hits & (original description: none) 0.07 Archaeplastida
Gb_02770 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.18 Archaeplastida
Gb_04117 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_04256 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida
Gb_05692 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.19 Archaeplastida
Gb_06760 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 Archaeplastida
Gb_07759 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.1 Archaeplastida
Gb_07934 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_08424 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.22 Archaeplastida
Gb_08526 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 Archaeplastida
Gb_10082 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.07 Archaeplastida
Gb_10404 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 Archaeplastida
Gb_15469 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.15 Archaeplastida
Gb_16634 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.17 Archaeplastida
Gb_16945 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.22 Archaeplastida
Gb_17559 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.11 Archaeplastida
Gb_18114 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.15 Archaeplastida
Gb_18456 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.17 Archaeplastida
Gb_19120 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.17 Archaeplastida
Gb_19756 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 Archaeplastida
Gb_20651 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Gb_21357 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.15 Archaeplastida
Gb_23276 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.11 Archaeplastida
Gb_24315 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_25019 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.1 Archaeplastida
Gb_25155 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.16 Archaeplastida
Gb_26000 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Gb_26646 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 Archaeplastida
Gb_26702 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.12 Archaeplastida
Gb_29642 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.15 Archaeplastida
Gb_30022 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.05 Archaeplastida
Gb_31534 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.06 Archaeplastida
Gb_31730 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.15 Archaeplastida
Gb_32699 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.12 Archaeplastida
Gb_32814 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_32952 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.16 Archaeplastida
Gb_33085 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Gb_33272 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 Archaeplastida
Gb_33568 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.08 Archaeplastida
Gb_34728 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_36049 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.18 Archaeplastida
Gb_36489 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 Archaeplastida
Gb_36638 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.21 Archaeplastida
Gb_39735 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.12 Archaeplastida
Gb_40420 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.09 Archaeplastida
Gb_41307 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP Neighborhood
InterPro domains Description Start Stop
IPR013103 RVT_2 5 84
No external refs found!