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  5. Gb_41271

Gb_41271


Description : splicing factor (WSL4)


Gene families : OG0011209 (Archaeplastida) Phylogenetic Tree(s): OG0011209_tree ,
OG_05_0011067 (LandPlants) Phylogenetic Tree(s): OG_05_0011067_tree ,
OG_06_0011718 (SeedPlants) Phylogenetic Tree(s): OG_06_0011718_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_41271
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
MA_762282g0010 No alias splicing factor (WSL4) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006353 DNA-templated transcription, termination IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 389 438
IPR002885 Pentatricopeptide_repeat 179 228
IPR002885 Pentatricopeptide_repeat 284 333
IPR002885 Pentatricopeptide_repeat 494 543
IPR002885 Pentatricopeptide_repeat 117 138
IPR002885 Pentatricopeptide_repeat 560 591
IPR002885 Pentatricopeptide_repeat 144 173
IPR002885 Pentatricopeptide_repeat 455 488
IPR002885 Pentatricopeptide_repeat 245 277
IPR002885 Pentatricopeptide_repeat 350 382
No external refs found!