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  5. AT3G05950

AT3G05950


Description : RmlC-like cupins superfamily protein


Gene families : OG0000034 (Archaeplastida) Phylogenetic Tree(s): OG0000034_tree ,
OG_05_0000016 (LandPlants) Phylogenetic Tree(s): OG_05_0000016_tree ,
OG_06_0000030 (SeedPlants) Phylogenetic Tree(s): OG_06_0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G05950
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00241260 evm_27.TU.AmTr_v1... Germin-like protein 3-7 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00067p00014150 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
AMTR_s00089p00119070 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
AMTR_s00089p00119480 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00089p00120230 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00089p00122070 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
AMTR_s00794p00001640 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
AT1G18970 GLP4 germin-like protein 4 0.07 Archaeplastida
AT1G18980 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
AT1G74820 No alias RmlC-like cupins superfamily protein 0.07 Archaeplastida
AT4G14630 GLP9 germin-like protein 9 0.1 Archaeplastida
AT5G38910 No alias RmlC-like cupins superfamily protein 0.04 Archaeplastida
AT5G38930 No alias RmlC-like cupins superfamily protein 0.06 Archaeplastida
AT5G38940 No alias RmlC-like cupins superfamily protein 0.06 Archaeplastida
AT5G39110 No alias RmlC-like cupins superfamily protein 0.07 Archaeplastida
AT5G39120 No alias RmlC-like cupins superfamily protein 0.04 Archaeplastida
GSVIVT01000061001 No alias No description available 0.03 Archaeplastida
GSVIVT01000062001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01000063001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01000065001 No alias Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana 0.08 Archaeplastida
GSVIVT01000066001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01000067001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01000068001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01000069001 No alias Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01000070001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01000103001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01013822001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.06 Archaeplastida
GSVIVT01021700001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.07 Archaeplastida
GSVIVT01021705001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.07 Archaeplastida
GSVIVT01028220001 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
GSVIVT01028222001 No alias Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01030965001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.07 Archaeplastida
GSVIVT01030967001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.06 Archaeplastida
GSVIVT01031079001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_05078 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.04 Archaeplastida
Gb_10684 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.03 Archaeplastida
Gb_18427 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.04 Archaeplastida
Gb_18428 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.04 Archaeplastida
Gb_34489 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os01g18170.1 No alias Germin-like protein 1-1 OS=Oryza sativa subsp. japonica... 0.08 Archaeplastida
LOC_Os01g72300.1 No alias Germin-like protein 1-4 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
LOC_Os02g29000.1 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os03g44880.1 No alias Putative germin-like protein 3-2 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os03g58980.1 No alias Germin-like protein 3-7 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os04g22080.1 No alias Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os04g52720.1 No alias Germin-like protein 4-1 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
LOC_Os08g08980.1 No alias Germin-like protein 8-4 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os08g08990.1 No alias Germin-like protein 8-5 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
LOC_Os08g09000.1 No alias Germin-like protein 8-6 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os08g09010.1 No alias Germin-like protein 8-7 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os08g09020.1 No alias Germin-like protein 8-9 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os08g09040.1 No alias Germin-like protein 8-9 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
LOC_Os08g13440.1 No alias Germin-like protein 8-12 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os08g35760.1 No alias Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os12g05840.1 No alias Germin-like protein 12-1 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os12g05860.1 No alias Germin-like protein 12-2 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os12g05870.1 No alias Putative germin-like protein 12-3 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os12g05880.1 No alias Putative germin-like protein 12-4 OS=Oryza sativa subsp.... 0.05 Archaeplastida
MA_1009260g0010 No alias No annotation 0.03 Archaeplastida
MA_10255546g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10325916g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10339776g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10345692g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10427432g0020 No alias Putative germin-like protein 2-2 OS=Oryza sativa subsp.... 0.03 Archaeplastida
MA_134891g0020 No alias Germin-like protein 8-4 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_43266g0010 No alias Germin-like protein 8-4 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_740063g0010 No alias Germin-like protein subfamily 1 member 1 OS=Arabidopsis... 0.02 Archaeplastida
MA_7641850g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_8404570g0010 No alias Germin-like protein subfamily 3 member 3 OS=Arabidopsis... 0.03 Archaeplastida
Mp2g01480.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.03 Archaeplastida
Mp2g01610.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.02 Archaeplastida
Mp2g01620.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.03 Archaeplastida
Mp2g01630.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.04 Archaeplastida
Mp2g01660.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.02 Archaeplastida
Mp2g24890.1 No alias Germin-like protein subfamily 2 member 2 OS=Arabidopsis... 0.03 Archaeplastida
Mp5g02530.1 No alias Oxalate oxidase 2 OS=Hordeum vulgare... 0.02 Archaeplastida
Mp5g16550.1 No alias Germin-like protein 3-6 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Mp5g23430.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Mp5g23510.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Mp6g03890.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.03 Archaeplastida
Mp8g18120.1 No alias Putative germin-like protein 3-2 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Pp3c23_1340V3.1 No alias germin-like protein 5 0.04 Archaeplastida
Pp3c23_1379V3.1 No alias germin-like protein 5 0.04 Archaeplastida
Pp3c23_1430V3.1 No alias germin-like protein 5 0.03 Archaeplastida
Pp3c23_1480V3.1 No alias germin-like protein 5 0.03 Archaeplastida
Smo103237 No alias Germin-like protein 2-4 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
Smo123769 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo227274 No alias Germin-like protein 1-3 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
Smo227294 No alias Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Smo85109 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
Solyc01g088260.3.1 No alias Putative germin-like protein 2-3 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Solyc01g088275.1.1 No alias Germin-like protein 8-2 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Solyc01g102890.4.1 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Solyc01g102895.1.1 No alias Germin-like protein subfamily 1 member 13 OS=Arabidopsis... 0.07 Archaeplastida
Solyc03g113570.1.1 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis... 0.03 Archaeplastida
Solyc05g006500.4.1 No alias Germin-like protein subfamily 1 member 1 OS=Arabidopsis... 0.03 Archaeplastida
Solyc09g089990.3.1 No alias Germin-like protein subfamily 1 member 15 OS=Arabidopsis... 0.03 Archaeplastida
Solyc11g006980.1.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e005327_P001 No alias Germin-like protein 3-5 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Zm00001e006921_P001 No alias Germin-like protein 4-1 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e013714_P001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e021636_P002 No alias Germin-like protein 12-2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e021637_P001 No alias Germin-like protein 12-2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e025458_P001 No alias Germin-like protein 1-1 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e031079_P001 No alias Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Zm00001e031621_P001 No alias Germin-like protein 1-3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e032937_P001 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Zm00001e039958_P001 No alias Germin-like protein 8-5 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e039959_P001 No alias Germin-like protein 8-5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000249 C-22 sterol desaturase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004620 phospholipase activity IEP Neighborhood
MF GO:0005217 intracellular ligand-gated ion channel activity IEP Neighborhood
BP GO:0006714 sesquiterpenoid metabolic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0006722 triterpenoid metabolic process IEP Neighborhood
BP GO:0006874 cellular calcium ion homeostasis IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0009975 cyclase activity IEP Neighborhood
BP GO:0010101 post-embryonic root morphogenesis IEP Neighborhood
BP GO:0010102 lateral root morphogenesis IEP Neighborhood
BP GO:0010263 tricyclic triterpenoid biosynthetic process IEP Neighborhood
BP GO:0010683 tricyclic triterpenoid metabolic process IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
BP GO:0016104 triterpenoid biosynthetic process IEP Neighborhood
BP GO:0016106 sesquiterpenoid biosynthetic process IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
BP GO:0019742 pentacyclic triterpenoid metabolic process IEP Neighborhood
BP GO:0019745 pentacyclic triterpenoid biosynthetic process IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0031559 oxidosqualene cyclase activity IEP Neighborhood
MF GO:0034075 arabidiol synthase activity IEP Neighborhood
BP GO:0045338 farnesyl diphosphate metabolic process IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0048767 root hair elongation IEP Neighborhood
BP GO:0055074 calcium ion homeostasis IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070704 sterol desaturase activity IEP Neighborhood
BP GO:0072503 cellular divalent inorganic cation homeostasis IEP Neighborhood
BP GO:0072507 divalent inorganic cation homeostasis IEP Neighborhood
InterPro domains Description Start Stop
IPR006045 Cupin_1 65 215
No external refs found!