Gb_41445

Description : transcription factor (DREB)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0011345 (SeedPlants) Phylogenetic Tree(s): OG_06_0011345_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_41445
Cluster	HCCA: Cluster_291

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00148p00084540	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013924001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01019519001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.01	Archaeplastida
GSVIVT01022277001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01034563001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01036388001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.01	Archaeplastida
Gb_03782	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_06377	No alias	transcription factor (ERF)	0.11	Archaeplastida
Gb_08781	No alias	transcription factor (DREB)	0.01	Archaeplastida
Gb_17208	No alias	transcription factor (DREB). C2H2 zinc finger...	0.02	Archaeplastida
Gb_25978	No alias	Ethylene-responsive transcription factor ABI4...	0.01	Archaeplastida
Gb_34846	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os02g43790.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os02g45420.1	No alias	transcription factor (DREB)	0.01	Archaeplastida
LOC_Os02g51670.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os03g08490.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
LOC_Os03g22170.1	No alias	transcription factor (ERF)	0.01	Archaeplastida
LOC_Os07g22730.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os07g22770.1	No alias	no description available(sp\|a0a3q7i5y9\|erfc3_sollc : 90.1)	0.04	Archaeplastida
MA_100577g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_100724g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_10082062g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_10274g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_10427743g0020	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_10491g0010	No alias	Ethylene-responsive transcription factor ERF017...	0.03	Archaeplastida
MA_116185g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_184464g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_203191g0010	No alias	transcription factor (ERF)	0.05	Archaeplastida
MA_4032g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_420358g0010	No alias	Ethylene-responsive transcription factor 1A...	0.03	Archaeplastida
MA_4481564g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_647924g0010	No alias	transcription factor (DREB)	0.01	Archaeplastida
MA_65985g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_71018g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_81029g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_844983g0010	No alias	no hits & (original description: none)	0.01	Archaeplastida
MA_914123g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_928517g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_9304g0020	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_959784g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_9905g0010	No alias	transcription factor (ERF)	0.07	Archaeplastida
Solyc04g007170.3.1	No alias	transcription factor (ERF)	0.08	Archaeplastida
Solyc04g054910.4.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc12g056980.1.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
Zm00001e019837_P001	No alias	no hits & (original description: none)	0.01	Archaeplastida
Zm00001e023870_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e033537_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0008037	cell recognition	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044237	cellular metabolic process	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
BP	GO:0048544	recognition of pollen	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	102	151

External Links

No external refs found!

Gb_41445

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation