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Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 470.0)
Gene families : OG0009791 (Archaeplastida) Phylogenetic Tree(s): OG0009791_tree ,
OG_05_0060722 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0053990 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_41545 | |
| Cluster | HCCA: Cluster_205 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Gb_16895 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | Archaeplastida | |
| MA_938202g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001871 | pattern binding | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Neighborhood |
| MF | GO:0030247 | polysaccharide binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| MF | GO:0051213 | dioxygenase activity | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 515 | 563 |
| IPR002885 | Pentatricopeptide_repeat | 413 | 461 |
| IPR002885 | Pentatricopeptide_repeat | 157 | 205 |
| IPR002885 | Pentatricopeptide_repeat | 66 | 103 |
| IPR002885 | Pentatricopeptide_repeat | 589 | 613 |
| IPR002885 | Pentatricopeptide_repeat | 354 | 379 |
| IPR002885 | Pentatricopeptide_repeat | 233 | 260 |
| IPR002885 | Pentatricopeptide_repeat | 292 | 321 |
| IPR002885 | Pentatricopeptide_repeat | 323 | 353 |
| IPR002885 | Pentatricopeptide_repeat | 489 | 514 |
| IPR002885 | Pentatricopeptide_repeat | 261 | 290 |
| IPR002885 | Pentatricopeptide_repeat | 381 | 411 |
| No external refs found! |