Description : SSU processome assembly factor (RRP9/YAO1)
Gene families : OG0005550 (Archaeplastida) Phylogenetic Tree(s): OG0005550_tree ,
OG_05_0006984 (LandPlants) Phylogenetic Tree(s): OG_05_0006984_tree ,
OG_06_0007863 (SeedPlants) Phylogenetic Tree(s): OG_06_0007863_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_41592 | |
Cluster | HCCA: Cluster_116 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00155p00078230 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | Archaeplastida | |
AT4G05410 | YAO | Transducin/WD40 repeat-like superfamily protein | 0.05 | Archaeplastida | |
Cpa|evm.model.tig00021179.21 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | Archaeplastida | |
Cre06.g278175 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.05 | Archaeplastida | |
GSVIVT01021618001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.07 | Archaeplastida | |
LOC_Os03g42770.1 | No alias | SSU processome assembly factor (RRP9/YAO1) | 0.1 | Archaeplastida | |
MA_10426194g0010 | No alias | SSU processome assembly factor (RRP9/YAO1) | 0.07 | Archaeplastida | |
Mp8g03800.1 | No alias | SSU processome assembly factor (RRP9/YAO1) | 0.07 | Archaeplastida | |
Pp3c13_22280V3.1 | No alias | Transducin/WD40 repeat-like superfamily protein | 0.02 | Archaeplastida | |
Pp3c15_1000V3.1 | No alias | Transducin/WD40 repeat-like superfamily protein | 0.06 | Archaeplastida | |
Solyc02g069770.3.1 | No alias | SSU processome assembly factor (RRP9/YAO1) | 0.09 | Archaeplastida | |
Zm00001e005033_P001 | No alias | SSU processome assembly factor (RRP9/YAO1) | 0.08 | Archaeplastida | |
Zm00001e012407_P002 | No alias | SSU processome assembly factor (RRP9/YAO1) | 0.1 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003743 | translation initiation factor activity | IEP | Neighborhood |
MF | GO:0003746 | translation elongation factor activity | IEP | Neighborhood |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
MF | GO:0004176 | ATP-dependent peptidase activity | IEP | Neighborhood |
CC | GO:0005694 | chromosome | IEP | Neighborhood |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Neighborhood |
BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
BP | GO:0006414 | translational elongation | IEP | Neighborhood |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
BP | GO:0009451 | RNA modification | IEP | Neighborhood |
BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
CC | GO:0030684 | preribosome | IEP | Neighborhood |
CC | GO:0032040 | small-subunit processome | IEP | Neighborhood |
BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
No external refs found! |