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  5. Gb_41658

Gb_41658


Description : Photosystem I P700 chlorophyll a apoprotein A1 (Fragment) OS=Ginkgo biloba (sp|q9muc0|psaa_ginbi : 257.0)


Gene families : OG0000489 (Archaeplastida) Phylogenetic Tree(s): OG0000489_tree ,
OG_05_0000306 (LandPlants) Phylogenetic Tree(s): OG_05_0000306_tree ,
OG_06_0000861 (SeedPlants) Phylogenetic Tree(s): OG_06_0000861_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_41658
Cluster HCCA: Cluster_297

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00250910 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.04 Archaeplastida
AMTR_s00063p00185460 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.04 Archaeplastida
AMTR_s00076p00111250 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.04 Archaeplastida
AMTR_s00334p00015340 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.04 Archaeplastida
AMTR_s01196p00002960 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Morus indica 0.04 Archaeplastida
ATCG00340 PSAB Photosystem I, PsaA/PsaB protein 0.03 Archaeplastida
ATCG00350 PSAA Photosystem I, PsaA/PsaB protein 0.03 Archaeplastida
GSVIVT01009295001 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Vitis vinifera 0.02 Archaeplastida
GSVIVT01017483001 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Vitis vinifera 0.02 Archaeplastida
GSVIVT01017484001 No alias Photosystem I P700 chlorophyll a apoprotein A1 OS=Populus alba 0.02 Archaeplastida
Gb_09026 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.21 Archaeplastida
Gb_09027 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Cycas... 0.04 Archaeplastida
Gb_11361 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.04 Archaeplastida
Gb_11944 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Cycas... 0.04 Archaeplastida
Gb_19163 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Cycas... 0.25 Archaeplastida
LOC_Os01g57962.1 No alias apoprotein PsaB of PS-I complex 0.09 Archaeplastida
LOC_Os01g57964.1 No alias apoprotein PsaA of PS-I complex 0.07 Archaeplastida
LOC_Os04g16760.1 No alias apoprotein PsaA of PS-I complex 0.04 Archaeplastida
LOC_Os05g01675.1 No alias apoprotein PsaA of PS-I complex 0.04 Archaeplastida
LOC_Os10g21248.1 No alias apoprotein PsaB of PS-I complex 0.06 Archaeplastida
LOC_Os10g21250.1 No alias apoprotein PsaA of PS-I complex 0.09 Archaeplastida
LOC_Os10g38229.1 No alias apoprotein PsaA of PS-I complex 0.06 Archaeplastida
LOC_Os10g38234.1 No alias apoprotein PsaB of PS-I complex 0.04 Archaeplastida
Mp1g07160.1 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.03 Archaeplastida
Mp1g16220.1 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.03 Archaeplastida
Mp3g20630.1 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.03 Archaeplastida
Smo236842 No alias Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.05 Archaeplastida
Solyc00g500056.1.1 No alias apoprotein PsaB of PS-I complex 0.04 Archaeplastida
Solyc00g500057.1.1 No alias apoprotein PsaA of PS-I complex 0.04 Archaeplastida
Solyc00g500138.1.1 No alias apoprotein PsaB of PS-I complex 0.04 Archaeplastida
Solyc00g500208.1.1 No alias apoprotein PsaB of PS-I complex 0.04 Archaeplastida
Solyc00g500209.1.1 No alias apoprotein PsaA of PS-I complex 0.04 Archaeplastida
Solyc01g017300.2.1 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.03 Archaeplastida
Solyc02g020960.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc06g009940.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A1 OS=Morus... 0.04 Archaeplastida
Solyc07g021250.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.06 Archaeplastida
Solyc12g033000.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.04 Archaeplastida
Solyc12g035580.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.03 Archaeplastida
Zm00001e003909_P001 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.06 Archaeplastida
Zm00001e008601_P001 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.07 Archaeplastida
Zm00001e042034_P001 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.07 Archaeplastida
Zm00001e042035_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e042055_P001 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.07 Archaeplastida
Zm00001e042056_P001 No alias apoprotein PsaB of PS-I complex 0.07 Archaeplastida
Zm00001e042075_P001 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.07 Archaeplastida
Zm00001e042076_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e042077_P001 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.07 Archaeplastida
Zm00001e042099_P001 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.07 Archaeplastida
Zm00001e042100_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e042101_P001 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.07 Archaeplastida
Zm00001e042150_P001 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.07 Archaeplastida
Zm00001e042151_P001 No alias apoprotein PsaB of PS-I complex 0.07 Archaeplastida
Zm00001e042164_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e042235_P001 No alias apoprotein PsaB of PS-I complex 0.07 Archaeplastida
Zm00001e042354_P001 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.07 Archaeplastida
Zm00001e042373_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e042404_P001 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.07 Archaeplastida
Zm00001e042440_P001 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.07 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0009579 thylakoid IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001280 PSI_PsaA/B 3 144
No external refs found!